sapI_empirical.csv

Overhang,AAA,AAC,AAG,AAT,ACA,ACC,ACG,ACT,AGA,AGC,AGG,AGT,ATA,ATC,ATG,ATT,CAA,CAC,CAG,CAT,CCA,CCC,CCG,CCT,CGA,CGC,CGG,CGT,CTA,CTC,CTG,CTT,GAA,GAC,GAG,GAT,GCA,GCC,GCG,GCT,GGA,GGC,GGG,GGT,GTA,GTC,GTG,GTT,TAA,TAC,TAG,TAT,TCA,TCC,TCG,TCT,TGA,TGC,TGG,TGT,TTA,TTC,TTG,TTT
TTT,1421,4,26,15,1,0,0,0,6,0,0,0,9,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,18,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
GTT,0,2878,3,107,0,33,0,1,0,12,0,0,0,90,0,0,0,8,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,216,0,0,0,3,0,0,0,1,0,0,0,4,0,0,0,33,0,0,0,0,0,0,0,0,0,0,0,0,0,0
CTT,1,0,2944,2,0,0,31,0,0,0,8,0,0,0,158,0,0,0,11,0,0,0,1,0,0,0,0,0,0,0,3,0,0,0,112,0,0,0,7,0,0,0,0,0,0,0,3,0,0,0,28,0,0,0,0,0,0,0,0,0,0,0,5,0
ATT,3,6,2,3524,0,0,0,6,0,0,0,10,0,0,0,74,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,28,0,0,0,0,0,0,0,0,0,0,0,0
TGT,0,0,0,0,2602,2,77,64,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,82,0,2,1,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,2,0,0,0,0
GGT,0,9,0,0,6,2661,6,164,0,11,0,0,0,37,0,0,0,0,0,0,0,11,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21,0,0,0,0,0,0,0,0,0,0
CGT,0,0,1,0,4,1,2414,5,0,0,8,0,0,0,21,0,0,0,0,0,0,0,7,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14,0,0,0,0,0,0,0,0,0
AGT,0,0,0,4,14,19,4,3293,0,0,0,6,0,0,0,10,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12,0,0,0,0,0,0,0,0
TCT,0,0,0,0,0,0,0,0,2753,3,84,12,3,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0,0,0
GCT,0,11,0,0,0,7,0,0,21,2867,17,146,0,36,0,1,0,0,0,0,0,0,0,0,0,28,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,290,0,0,0,8,0,0,0,0,0,0,0,0,0,0,0,74,0,1,0,0,0,0
CCT,0,0,2,0,0,0,6,0,3,2,2951,4,0,0,16,0,0,0,0,0,0,0,0,0,0,0,19,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,160,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,49,0,0,0,0,0
ACT,0,0,0,3,0,0,0,0,34,62,43,3293,0,1,3,6,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,164,0,0,0,1,0,0,0,0,0,0,0,0,1,1,0,64,0,0,0,0
TAT,0,0,0,0,1,0,0,0,1,0,0,0,2775,5,42,28,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0
GAT,0,5,0,1,0,17,0,1,0,8,0,0,9,3622,16,97,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31,0,0
CAT,0,0,1,0,0,0,22,0,0,0,3,0,8,0,3217,2,0,0,0,2,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,120,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46,0
AAT,0,0,0,0,0,0,0,3,0,0,0,4,37,38,4,3524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,0,0,0,0,0,0,0,0,0,1,0,107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15
TTG,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1796,2,52,46,2,0,0,0,3,0,0,0,46,0,10,5,1,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
GTG,0,39,0,0,1,11,0,0,0,0,0,0,0,0,0,0,3,2096,10,120,0,40,1,1,0,37,0,0,0,251,0,3,0,12,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,59,0,0,0,0,0,0,0,0,0,0,0,3,0,0
CTG,0,0,17,0,0,0,6,0,0,0,1,0,0,0,5,0,2,2,2429,3,0,0,41,0,0,0,25,0,0,0,326,3,0,0,11,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52,0,0,0,3,0,0,0,0,0,0,0,10,0
ATG,0,0,0,4,0,0,0,3,0,0,0,0,0,0,0,0,8,37,18,3217,0,0,1,16,0,0,0,21,14,1,5,158,0,0,0,16,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42,0,0,0,0,0,0,0,0,0,0,0,4
TGG,0,0,0,0,45,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1839,8,69,49,1,0,0,0,6,0,0,0,0,0,0,0,6,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11,0,0,0,0,0,0,0,0,0,0,0
GGG,0,0,0,0,0,118,0,0,0,0,0,0,0,0,0,0,0,20,0,0,36,2240,8,160,0,16,0,0,0,44,0,0,0,0,0,0,0,28,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,157,0,1,0,0,0,0,0,0,0,0
CGG,0,0,0,0,0,0,125,0,0,0,0,0,0,0,0,0,0,0,2,0,10,8,1674,19,0,0,2,0,0,0,25,0,0,0,0,0,0,0,17,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79,0,0,0,0,0,0,0,0,0
AGG,0,0,0,0,0,0,0,43,0,0,0,0,0,0,0,0,0,2,0,3,79,78,54,2951,0,0,0,8,1,2,1,8,0,0,0,0,0,0,0,17,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,84,0,0,0,0,0,0,0,0
TCG,0,0,0,0,0,0,0,0,4,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,1229,5,79,14,9,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,8,0,0,0,0,0,0,0
GCG,0,0,0,0,0,0,0,0,0,52,0,0,0,0,0,0,0,51,0,2,0,11,0,0,39,1879,17,171,0,68,0,7,0,0,0,0,0,0,0,0,0,11,0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,157,0,2,0,1,0,0
CCG,0,0,0,0,0,0,0,0,0,0,54,0,0,0,1,0,1,1,10,0,0,0,2,0,5,2,1674,7,1,0,41,1,0,0,0,0,0,0,0,0,0,0,8,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,69,0,0,0,0,0
ACG,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,1,0,22,0,0,0,6,54,186,125,2414,4,1,6,31,0,0,0,0,0,0,0,0,0,0,0,6,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,77,0,0,0,0
TAG,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,2205,4,52,28,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0
GAG,0,0,0,0,0,0,0,0,0,0,0,0,0,10,0,0,0,7,0,0,0,4,0,0,0,7,0,1,22,2855,11,112,0,0,4,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,75,2,0
CAG,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18,0,0,0,0,0,0,0,10,0,0,0,2,0,9,7,2429,11,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52,0
AAG,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,1,1,0,0,2,0,2,0,1,67,63,17,2944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,26
TTC,10,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2120,1,75,31,11,0,1,0,13,0,0,0,43,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
GTC,0,93,0,1,0,3,0,0,0,3,0,0,0,0,0,0,0,3,0,0,0,1,0,0,0,0,0,0,0,0,0,0,7,3273,8,287,0,115,0,8,0,106,0,0,0,252,0,4,0,6,0,0,0,0,0,0,0,0,0,0,0,0,0,0
CTC,0,0,63,0,0,0,1,0,0,0,2,0,0,0,1,0,0,0,7,0,0,0,0,0,0,0,0,0,0,0,0,0,3,2,2855,0,0,0,68,0,0,0,44,0,0,0,251,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0
ATC,0,0,0,38,0,0,0,1,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12,50,10,3622,2,0,0,36,0,0,0,37,1,0,0,90,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0
TGC,0,0,0,0,39,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,2395,5,157,74,0,0,0,0,5,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0
GGC,0,0,0,0,0,164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,36,0,1,46,2687,11,290,0,46,0,0,1,106,0,1,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0
CGC,0,0,2,0,0,0,186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,7,0,22,9,1879,28,0,0,16,0,0,0,37,0,0,0,1,0,0,0,5,0,0,0,0,0,0,0,0,0
AGC,0,0,0,0,0,0,0,62,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,1,0,0,8,87,123,52,2867,0,0,0,11,0,3,0,12,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0
TCC,0,0,0,0,0,0,0,0,10,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,1,0,2361,3,157,21,5,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0
GCC,0,0,0,0,0,0,0,0,0,123,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,9,0,0,0,0,0,0,0,62,0,0,0,18,0,1,84,2687,28,297,9,115,3,3,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0
CCC,0,0,0,0,0,0,0,0,0,0,78,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0,0,0,4,1,0,0,11,0,10,1,2240,11,0,1,40,1,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0
ACC,0,0,0,0,0,0,0,0,0,0,0,19,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,17,0,0,0,7,97,164,118,2661,4,3,11,33,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0
TAC,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,2774,6,59,33,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0
GAC,0,0,0,0,0,1,0,0,0,0,0,0,0,50,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,16,0,0,1,62,0,1,0,36,0,0,63,3273,12,216,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0
CAC,0,0,0,0,0,0,1,0,0,0,2,0,0,0,37,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,0,7,0,0,0,51,0,0,0,20,0,19,3,2096,8,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0
AAC,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,11,0,0,0,9,100,93,39,2878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4
TTA,8,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,553,1,2,8,0,0,0,0,2,0,0,0,2,0,0,0
GTA,0,100,0,0,0,4,0,0,0,0,0,0,0,1,0,0,0,19,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63,0,0,0,9,0,0,0,1,0,0,2,0,0,0,0,2774,1,50,0,5,0,0,0,5,0,0,0,43,0,0
CTA,0,0,67,0,0,0,4,0,0,0,1,0,0,0,14,0,0,0,9,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,22,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,2205,1,0,0,9,0,0,0,6,0,0,0,46,1
ATA,0,0,0,37,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,8,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9,0,0,0,0,0,0,0,0,0,0,0,0,3,5,0,2775,0,0,0,3,0,0,0,2,0,0,0,9
TGA,0,0,0,0,23,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,828,0,8,8,0,0,0,0,2,0,0,0
GGA,0,0,0,0,0,97,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84,0,0,0,0,0,0,0,0,0,0,0,4,0,0,9,2361,0,51,0,0,0,0,1,13,0,0
CGA,0,0,0,0,0,0,54,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1229,2,0,0,1,0,0,0,3,0
AGA,0,0,0,0,0,0,0,34,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21,0,0,0,0,0,0,0,0,0,0,0,1,16,10,4,2753,0,0,0,0,1,0,0,6
TCA,0,0,0,0,0,0,0,0,16,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,828,2,11,3,0,0,0,0
GCA,0,0,0,0,0,0,0,0,0,87,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,22,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,46,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21,2395,6,82,0,11,0,0
CCA,0,0,1,0,0,0,0,0,0,0,79,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,1839,0,0,0,2,0
ACA,0,0,0,0,0,0,0,0,0,0,0,14,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6,0,0,1,0,0,0,0,1,0,0,0,0,23,39,45,2602,0,0,0,1
TAA,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,553,0,5,1
GAA,0,0,0,0,0,0,0,0,0,1,0,0,0,12,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7,0,0,0,0,0,0,0,4,0,0,0,3,0,0,3,2120,1,18
CAA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,2,0,0,0,1,0,1,0,1796,0
AAA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,10,1,1421