Skip to content

Handle CellPose mask export data as part of data packaging #45

Description

@d33bs

It may be possible to export CellPose masks, then use the same masks as input for CellProfiler and DeepProfiler, storing the masks as data within data packaging steps for provenance. This may also entail using the masks on IC images to detail exact segmented data used.

Came up in conversation with @jenna-tomkinson based on #41

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

      Milestone

      No milestone

      Relationships

      None yet

      Development

      No branches or pull requests

      Issue actions