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@giffordlabcvr

Rob J. Gifford Lab

Comparative Virus Research | Collaborative Virus Research

Overview

The Gifford Lab conducts scientific investigations into the evolution of viruses and their impact on host species.

Research themes include:

  • Long-term evolution of viruses: Exploring how viruses evolve over extended timescales.
  • Origins and emergence of viral pathogens: Investigating the evolutionary history and cross-species transmission events that give rise to new viral pathogens.
  • Impact of viruses on host species evolution: Examining how interactions with viruses shapes the evolution of host species.
  • Paleovirology: Uncovering the ancient interactions between viruses and hosts through the study of endogenous viral elements (EVEs).

Software & Resources

We are dedicated to advancing comparative genomics by creating open resources that promote collaborative research.

Our main development focus is the GLUE software framework, and various genomics resources developed using it.

Please check out the GLUE Genomics blog for more information.

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  1. gluetools gluetools Public

    An open, platform-independent software toolkit for storage and interpretation of sequence data, implemented in Java.

    Java 12 2

  2. Dengue-GLUE Dengue-GLUE Public

    A GLUE project for dengue virus (DENV)

    JavaScript 3

  3. HCV-GLUE HCV-GLUE Public

    A GLUE project for Hepatitis C virus (HCV)

    F* 4

  4. HBV-GLUE HBV-GLUE Public

    A GLUE project for hepatitis B virus (HBV).

    JavaScript 2 1

  5. Flavivirus-GLUE Flavivirus-GLUE Public

    A GLUE project for comparative genomic analysis of flaviviruses

    JavaScript 1

  6. RVdb RVdb Public

    A GLUE project for retroviruses (family Retroviridae)

    JavaScript

Repositories

Showing 10 of 52 repositories
  • ERVdb-HomoSapiens Public

    Extension to ERVdb incorporating all ERVs in the human genome

    giffordlabcvr/ERVdb-HomoSapiens's past year of commit activity
    JavaScript 1 0 0 0 Updated Oct 17, 2026
  • NCBI-HCV-GLUE Public

    Extension to HCV-GLUE - contains all published HCV data from NCBI, plus analysis logic for HCV genomes.

    giffordlabcvr/NCBI-HCV-GLUE's past year of commit activity
    JavaScript 0 0 0 0 Updated Sep 29, 2026
  • IFNL-Evolution Public

    Resources supporting comparative and phylogenetic analysis of IFNL genes

    giffordlabcvr/IFNL-Evolution's past year of commit activity
    JavaScript 0 0 0 0 Updated Sep 10, 2026
  • gluetools Public

    An open, platform-independent software toolkit for storage and interpretation of sequence data, implemented in Java.

    giffordlabcvr/gluetools's past year of commit activity
    Java 12 2 2 0 Updated Sep 8, 2026
  • RVdb Public

    A GLUE project for retroviruses (family Retroviridae)

    giffordlabcvr/RVdb's past year of commit activity
    JavaScript 0 0 0 0 Updated Aug 14, 2026
  • Flavivirus-GLUE Public

    A GLUE project for comparative genomic analysis of flaviviruses

    giffordlabcvr/Flavivirus-GLUE's past year of commit activity
    JavaScript 1 0 0 0 Updated Jul 17, 2026
  • RABV-GLUE Public

    A GLUE project for Rabies Virus (RABV).

    giffordlabcvr/RABV-GLUE's past year of commit activity
    JavaScript 2 0 0 0 Updated May 29, 2026
  • YFV-GLUE Public

    A GLUE project for yellow fever virus (YFV)

    giffordlabcvr/YFV-GLUE's past year of commit activity
    JavaScript 0 0 0 0 Updated Apr 22, 2026
  • HCV-GLUE Public

    A GLUE project for Hepatitis C virus (HCV)

    giffordlabcvr/HCV-GLUE's past year of commit activity
    F* 4 0 3 0 Updated Feb 11, 2026
  • .github Public

    Organisation overview

    giffordlabcvr/.github's past year of commit activity
    0 0 0 0 Updated Feb 3, 2026

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