Greene Laboratory
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Repositories
- lab-website-template Public template
An easy-to-use, flexible website template for labs. https://doi.org/10.5281/zenodo.17228741
- hgsoc-reconstruction Public
- hgsoc_data_detective Public
- hgsoc-concordance-rotation Public
- multi-dwpc Public
This repository contains scripts testing aggregate degree weighted path count (DWPC) statistics.
- fm-pm-eval-manuscript Public
Collaborative manuscript for companion repo: github.com/greenelab/fm-pm-evaluator.
- fm-pm-evaluator Public
Realizing the benefits of foundation models requires careful evaluations that map the boundaries of generalization.
- T21-eQTL Public
Cohort-scale extension of Hunter et al. (2023) "Transcription dosage compensation does not occur in Down syndrome" (BMC Biology 21:228), applied to the Human Trisome Project (HTP): 304 T21 + 95 Control whole-blood RNA-seq samples, 302 of the T21 subjects with paired chr21 genotypes.
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