Issues

• How to use Gramtools build based on multiple VCF files?

  iqbal-lab-org/gramtools#172 · Filter by author cvn001 opened on Sep 8, 2023
  1

• install error

  iqbal-lab-org/gramtools#167 · Filter by author 8banzhuan opened on Jul 21, 2022
  1

• Error while running gramtools

  iqbal-lab-org/gramtools#165 · Filter by author khodor14 opened on Mar 4, 2022
  2

• 'N' in reference genome fasta not supported

  iqbal-lab-org/gramtools#156 · Filter by author bricoletc opened on Mar 1, 2021

• Pf benchmarking

  iqbal-lab-org/gramtools#152 · Filter by author bricoletc opened on Oct 27, 2019
  1

• Performance cost of kmer-indexing

  iqbal-lab-org/gramtools#146 · Filter by author iqbal-lab opened on Jun 2, 2019
  1

• Reducing index size

  enhancement
  iqbal-lab-org/gramtools#145 · Filter by author bricoletc opened on May 7, 2019
  1

• Multi-threading improvements

  bugenhancement
  iqbal-lab-org/gramtools#144 · Filter by author bricoletc opened on Apr 11, 2019
  4

• Build PRG from MSA and more sparsely from VCF

  enhancement
  iqbal-lab-org/gramtools#130 · Filter by author ffranr opened on Jun 7, 2018
  4

  

• Benchmarking basic MHC (8haplos): build and quasimap

  benchmark
  iqbal-lab-org/gramtools#125 · Filter by author iqbal-lab opened on Jun 3, 2018
  

• Release includes pre built backend binaries

  enhancement
  iqbal-lab-org/gramtools#101 · Filter by author ffranr opened on Apr 4, 2018
  4

• Systematic decisions to ignore regions of the PRG

  help wantedspecification
  iqbal-lab-org/gramtools#96 · Filter by author iqbal-lab opened on Mar 30, 2018
  8

  

• Faster kmer hashing

  enhancement
  iqbal-lab-org/gramtools#71 · Filter by author ffranr opened on Aug 31, 2017
  14

• Add --min-allele-freq argument to build command

  enhancement
  iqbal-lab-org/gramtools#53 · Filter by author sm0179 opened on Jul 7, 2017
  4