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docs: document OME-Zarr for particular scientific modalities - #565

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joshmoore merged 52 commits into
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Sep 29, 2026
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joshmoore merged 52 commits into
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@lubianat

@lubianat lubianat commented Jul 31, 2026 •

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Open to new ideas.

This goes in line with the idea of displaying "where the science is" in connection with NGFF.

Pages to curate resources releated to OME-NGFF plus a particular scientific community (WSI, Volume-EM, dynamics, omics, etc).

The goal is to be able to provide a quick link to share that showcases the value of OME-NGFF for people heavily invested in topic X.

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lubianat changed the base branch from main to link-fixes August 3, 2026 19:08
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lubianat commented Aug 4, 2026

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@uermel added a Cryo-ET page (as mentioned on uermel/chimerax-ome-zarr#18)

If you have anything else to add, feel free to do so.

It is all mostly a draft and pages are supposed to be somewhat simple

@uermel

uermel commented Aug 4, 2026 •

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Looks good to me, I don't think I have anything to add. CryoET portal seems duplicated in cryoET section and in the volume EM section, not sure if that is intentional (it's not wrong).

Base automatically changed from link-fixes to main August 7, 2026 09:10
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lubianat marked this pull request as ready for review August 20, 2026 14:46
@lubianat lubianat added the documentation Improvements or additions to documentation label Aug 21, 2026
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I may add a section on 'expansion microscopy' to the hub. I saw an interesting discussion at
https://forum.image.sc/t/does-anyone-use-multiscale-coordinatetransformations/122243 and
AI-HHMI/miao#25

(ping @jo-mueller , interesting RFC-5 use case!)

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Other than the missing item from the TOC, 👍

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joshmoore merged commit b3d2b46 into main Sep 29, 2026
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joshmoore deleted the topic_hub branch September 29, 2026 17:42
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5 participants